SHIFTZ v1.0 - A Dihedral Angles to Chemical Shift Translator ---------------------------------------------------------------- August 1999 Author: Alexander Nip, Haiyan Zhang Supervisor: David S. Wishart Institution: Faculty of Pharmacy and Pharmaceutical Sciences University of Alberta Edmonton, Alberta Canada T6G 2N8 E-Mail: dsw@redpoll.pharmacy.ualberta.ca PURPOSE ------- This program is written to facilitate chemical shift prediction. It is part of an on-going effort for accurate prediction of chemical shifts from dihedral angles. This program previously called as PHIPSI2CS v0.3. PLATFORMS --------- The program is written in C. It could be compiled straight forwardly on Linux, UNIX platforms such as IRIX and SUNOS. USAGE ----- At the prompt type "shiftz". The file "infile" is expected to contain the dihedral angle information and should have the format for example: 1 S 0.000 2.644 2 D -67.369 -14.808 3 K -111.575 11.533 4 I -95.342 123.854 5 I -71.378 134.658 6 H -89.169 111.710 7 L -97.526 153.601 8 T -131.646 166.678 9 D -56.791 -42.105 10 D -74.706 -27.849 11 S -89.064 -6.917 12 F -55.517 -45.091 13 D -63.160 -49.853 14 T -58.920 -41.970 15 D -85.287 -29.442 16 V -108.660 -52.210 17 L -68.770 -33.195 18 K -104.071 16.919 19 A -65.590 148.287 20 D -90.262 123.303 The first column contain the number of residue; the second column contains the residue type in one-letter code and the last two columns contain respectively the phi and the psi dihedral angles. The columns are to be separated by spaces. If no file is specified, the program reads from the standard input (stdin) and so it can be used as a filter. Distribution ------------ This distribution contains the following files and directories: INSTALL - a description of installation README - this file dbase/ - database files essential to program operation rc/ - program resource file src/ - program source codes INSTALL ------- Please refer to the file INSTALL included in this directory. ACKNOWLEDGEMENT --------------- This work is supported by a fellowship from MRC and PMAC. BUG REPORTS ----------- Please send bug report or further inquiries to David Wishart dsw@redpoll.pharmacy.ualberta.ca